Gene Expression AtlasGene Expression Atlas
Enter gene IDs to view TPM expression across samples in the selected dataset. Bar charts show precise TPM values for each sample; bar height reflects expression level.
Datasets
Unified Expression Reference (Tissue / Fruit Development)
From left to right: Stem S / Leaf L / Bud B / Fruit F1–F7 (young → mature fruit). When searching for a gene, the bar charts below follow the same order; bar height shows TPM. NA = no data for that sample.
Gene Search
Gene ID must include the haplotype prefix，e.g. TWCG_HapA1.005328、TWCG_HapA2.000025。multiple genes can be queried at once，, comma-separated。
Unified view samples: Stem (S) / Leaf (L) / Bud (B) / Fruit F1–F7 (10 total). Bar values show TPM for that sample (transcripts per million).
Gene Search
This dataset is the fungal-side transcriptome of a dual RNA-seq time course of C. shiraiana infecting Nicotiana tabacum (PLGNL susceptible / RPM1-2 resistant).
Samples: 0h / 3h / 9h / 18h / 36h × two lines (within-line biological replicate mean); bar values show TPM.
Gene Search
This dataset is the mulberry-side transcriptome of TWCG fruit inoculated with Ciboria shiraiana.
Samples: 0 h / 4 h / 1 d / 4 d / 7 d post inoculation (time-point mean); bar values show TPM.
Search results
• This page is a unified expression view: one query shows a gene across stem (S), leaf (L), bud (B) and fruit F1–F7 (young to mature fruit).
• The top reference shows real long-fruit mulberry morphology (stem/leaf/bud/fruit F1–F7) and serves as the sample-order key for the bar charts.
• Each gene is shown as a bar chart over the 10 samples; bar height and the TPM value above each bar correspond one-to-one.
• Shows C. shiraiana gene expression dynamics during infection of susceptible (PLGNL, green) and resistant (RPM1-2, purple) tobacco.
• x-axis: five time points 0h / 3h / 9h / 18h / 36h; bar height = within-line mean TPM at that time point. NA = no data for that sample.
• Shows TWCG mulberry gene expression dynamics after Ciboria shiraiana inoculation.
• x-axis: five time points 0 h / 4 h / 1 d / 4 d / 7 d post inoculation; bar height = time-point mean TPM. NA = no data for that sample.